STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005022653Leucine-rich repeat LGI family, member 3. (517 aa)    
Predicted Functional Partners:
ENSSORP00005040027
ADAM metallopeptidase domain 23a.
     
 0.774
ENSSORP00005021452
annotation not available
    
  0.715
ENSSORP00005024387
ADAM metallopeptidase domain 22.
     
 0.697
ENSSORP00005003690
annotation not available
     
 0.535
ENSSORP00005003712
annotation not available
     
 0.535
ENSSORP00005003772
annotation not available
     
 0.535
ENSSORP00005031188
ADAM metallopeptidase domain 11.
     
 0.535
ENSSORP00005003959
annotation not available
   
  0.529
ENSSORP00005035824
annotation not available
    
  0.520
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
 0.511
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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