STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115418507SH2 domain-containing adapter protein D-like. (396 aa)    
Predicted Functional Partners:
TMEM100
Transmembrane protein 100.
   
    0.550
LOC115428854
Gap junction alpha-4 protein-like.
      
 0.505
ENSSORP00005037046
Fyn-related Src family tyrosine kinase.
    
 0.428
flt4
Fms related tyrosine kinase 4.
    
  0.414
ENSSORP00005019730
annotation not available
    
  0.414
LOC115427219
Vascular endothelial growth factor receptor kdr-like.
    
  0.414
kdr
Kinase insert domain receptor.
    
  0.414
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.