STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nol12Nucleolar protein 12. (234 aa)    
Predicted Functional Partners:
brix1
Biogenesis of ribosomes BRX1.
   
 
 0.993
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.988
ebna1bp2
EBNA1 binding protein 2.
   
 
 0.985
mrto4
MRT4 homolog, ribosome maturation factor.
   
 
 0.970
ftsj3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.968
rsl24d1
Ribosomal L24 domain containing 1.
   
 
 0.968
gtpbp4
GTP binding protein 4.
   
 
 0.960
LOC115439703
Ribosomal L1 domain-containing protein 1-like.
   
 
 0.958
ddx55
DEAD-box helicase 55.
   
 
 0.957
ddx18
DEAD-box helicase 18.
   
 
 0.951
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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