STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A1Solute carrier family 39 member 1. (332 aa)    
Predicted Functional Partners:
LOC115420838
Sorting and assembly machinery component 50 homolog A.
    
 0.927
samm50
SAMM50 sorting and assembly machinery component.
    
 0.927
LOC115435444
Metaxin-1-like.
    
 0.922
ENSSORP00005031456
Metaxin 3.
    
 0.922
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.874
LOC115410617
Mitochondrial import receptor subunit TOM22 homolog.
    
 0.870
ENSSORP00005037969
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
    
 0.822
LOC115435265
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.731
ENSSORP00005006516
PVR cell adhesion molecule related 2 like.
   
 0.731
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.731
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.