STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005023781Transmembrane anterior posterior transformation 1a. (432 aa)    
Predicted Functional Partners:
LOC115436527
SUN domain-containing ossification factor-like.
    
   0.720
suco
SUN domain containing ossification factor.
    
   0.720
ENSSORP00005036716
Transformer 2 alpha homolog.
   
 
  0.524
LOC115414107
Transformer-2 protein homolog beta-like.
   
 
  0.524
tra2b
Transformer 2 beta homolog.
   
 
  0.524
LOC115415054
Zinc finger FYVE domain-containing protein 1-like.
   
    0.497
LOC115431730
Zinc finger FYVE domain-containing protein 1-like.
   
    0.497
ZFYVE1
Zinc finger FYVE domain-containing protein 1-like.
   
    0.497
LOC115421021
Leptin-like.
      
 0.475
ENSSORP00005008508
Secreted phosphoprotein 2.
   
  
 0.440
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.