STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005023957annotation not available (284 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.709
ENSSORP00005033120
Fras1 related extracellular matrix 1a.
   
  0.685
ENSSORP00005046742
annotation not available
   
  0.685
ENSSORP00005046749
Fras1 related extracellular matrix 1b.
   
  0.685
LOC115430583
Peripheral plasma membrane protein CASK-like.
   
 0.677
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.677
ENSSORP00005024951
TNF receptor-associated factor 7.
    
 0.632
mars1
methionyl-tRNA synthetase 1.
   
 0.589
ubxn7
UBX domain protein 7.
    
 0.556
bag3
BCL2 associated athanogene 3.
   
  0.547
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.