STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115427349Ecotropic viral integration site 5 ortholog-like. (1179 aa)    
Predicted Functional Partners:
LOC115424388
Ras-related protein Rab-35-like.
   
 0.662
ENSSORP00005014873
Intraflagellar transport 27 homolog (Chlamydomonas).
   
 0.662
rab35
RAB35, member RAS oncogene family.
   
 0.662
ENSSORP00005021924
ADP-ribosylation factor-like 15a.
     
 0.557
ENSSORP00005026317
ADP-ribosylation factor 6a.
     
 0.557
ENSSORP00005051900
ADP-ribosylation factor 6b.
     
 0.557
LOC115425752
Interleukin-6 receptor subunit beta-like.
   
 
  0.439
LOC115414270
ATPase inhibitor B, mitochondrial-like.
   
 
  0.439
ENSSORP00005023035
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4.
   
 
  0.439
ENSSORP00005023036
annotation not available
   
 
  0.439
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.