STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115422068Sodium- and chloride-dependent taurine transporter-like. (626 aa)    
Predicted Functional Partners:
ENSSORP00005031522
Solute carrier family 1 member 1.
    
 0.633
slc6a2
Solute carrier family 6 member 2.
  
  
 
0.533
ENSSORP00005057150
Solute carrier family 6 member 3.
  
  
 
0.532
LOC115418622
Excitatory amino acid transporter 1-like.
    
 0.507
SLC1A3
Solute carrier family 1 member 3.
    
 0.507
LOC115426276
Excitatory amino acid transporter 1-like.
    
 0.507
ENSSORP00005010389
Solute carrier family 1 member 9.
  
 
 0.487
slc1a2
Solute carrier family 1 member 2.
  
 
 0.487
ENSSORP00005046611
Solute carrier family 1 member 2a.
  
 
 0.487
ENSSORP00005007254
Solute carrier family 1 member 7b.
    
 0.484
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.