STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115422631Keratin, type II cytoskeletal 8-like. (524 aa)    
Predicted Functional Partners:
bag3
BCL2 associated athanogene 3.
    
 0.979
ENSSORP00005004208
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.968
bag2
BCL2 associated athanogene 2.
    
 0.845
ino80e
INO80 complex subunit E.
   
 0.744
cct5
Chaperonin containing TCP1 subunit 5.
    
  0.742
ENSSORP00005036572
RuvB-like AAA ATPase 2.
   
 
 0.718
ENSSORP00005055286
Chaperonin containing TCP1, subunit 7 (eta).
   
  0.711
cct2
Chaperonin containing TCP1 subunit 2.
    
  0.708
cct6a
Chaperonin containing TCP1 subunit 6A.
    
  0.707
ruvbl1
RuvB like AAA ATPase 1.
   
 
 0.696
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.