STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fat4FAT atypical cadherin 4. (4973 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 0.857
ENSSORP00005021929
annotation not available
    
 0.784
LOC115419697
Junction plakoglobin-like.
    
 0.784
FJX1
Four-jointed box protein 1-like.
   
 0.729
ENSSORP00005043567
Four-jointed box kinase 1.
   
 0.729
ENSSORP00005026502
Protocadherin-related 15a.
   
0.708
ENSSORP00005041761
Protocadherin-related 15b.
   
0.708
LOC115428257
Catenin beta-1-like.
    
 0.691
cdh17
Cadherin 17.
   
0.688
LOC115434373
Cadherin-5-like.
     
0.665
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.