STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnrnph1Heterogeneous nuclear ribonucleoprotein H1. (407 aa)    
Predicted Functional Partners:
ENSSORP00005009340
Heterogeneous nuclear ribonucleoprotein M.
   
 0.833
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.818
LOC115430378
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.818
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.816
hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.816
ncbp2
Nuclear cap binding protein subunit 2.
   
 0.784
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.776
ENSSORP00005014856
annotation not available
   
 0.771
ENSSORP00005014858
annotation not available
   
 0.771
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.771
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.