STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005024861annotation not available (173 aa)    
Predicted Functional Partners:
setdb1
SET domain bifurcated histone lysine methyltransferase 1.
    
 
 0.858
ENSSORP00005021640
annotation not available
    
 
 0.858
ENSSORP00005001634
annotation not available
    
 
 0.830
atf7ip
Activating transcription factor 7 interacting protein.
    
 
 0.830
ENSSORP00005015361
annotation not available
    
 
 0.786
LOC115428275
Flocculation protein FLO11-like.
    
 
 0.773
suox
Sulfite oxidase.
      
 0.539
med21
Mediator complex subunit 21.
   
    0.491
suv39h1
Suppressor of variegation 3-9 homolog 1.
    
 
 0.474
pdrg1
P53 and DNA damage regulated 1.
      
 0.430
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.