STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005024862annotation not available (945 aa)    
Predicted Functional Partners:
ripk2
Receptor interacting serine/threonine kinase 2.
   
 0.567
rps27a
Ribosomal protein S27a.
    
  0.496
LOC115436394
Apoptosis-associated speck-like protein containing a CARD.
   
 0.493
LOC115436393
Apoptosis-associated speck-like protein containing a CARD.
   
 0.493
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
  0.480
rfxank
Regulatory factor X associated ankyrin containing protein.
    
 0.469
ripk4
Receptor interacting serine/threonine kinase 4.
    
  0.454
LOC115437146
ubiquitin-60S ribosomal protein L40-like.
    
  0.453
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.453
LOC115412982
E3 SUMO-protein ligase RanBP2-like.
   
 
  0.448
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.