STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005024914Dynein, cytoplasmic 1, intermediate chain 2a. (611 aa)    
Predicted Functional Partners:
dynlrb1
Dynein light chain roadblock-type 1.
   
 0.973
ENSSORP00005025418
annotation not available
   
 0.973
dctn2
Dynactin subunit 2.
    
 0.968
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
   
 0.964
ENSSORP00005054634
Dynein, cytoplasmic 1, light intermediate chain 1.
   
 0.964
DYNLL2
Dynein light chain 2, cytoplasmic.
   
 0.963
dynlt1
Dynein light chain Tctex-type 1.
   
 0.961
LOC115425668
Dynein light chain 2, cytoplasmic-like.
   
 0.961
ENSSORP00005053644
annotation not available
    
 0.956
DYNLT3
Dynein light chain Tctex-type 3.
   
 0.951
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.