STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115437019DNA polymerase delta subunit 3-like. (437 aa)    
Predicted Functional Partners:
pold2
DNA polymerase delta 2, accessory subunit.
   
 0.992
pold1
DNA polymerase delta 1, catalytic subunit.
    
 0.991
mad2l2
Mitotic arrest deficient 2 like 2.
    
 0.989
ENSSORP00005008808
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.988
pcna
Proliferating cell nuclear antigen.
   
 0.967
ENSSORP00005004321
Glycogen synthase 1 (muscle).
   
 0.926
LOC115429966
Glycogen [starch] synthase, liver-like.
   
 0.926
pole
DNA polymerase epsilon, catalytic subunit.
    
 0.919
ENSSORP00005034354
Polymerase (DNA directed), alpha 1.
    
 0.912
DNA2
DNA replication helicase/nuclease 2.
    
 0.880
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.