STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKLFChemokine like factor. (150 aa)    
Predicted Functional Partners:
cmtm3
CKLF like MARVEL transmembrane domain containing 3.
      
0.545
cmtm4
CKLF like MARVEL transmembrane domain containing 4.
      
 0.539
cmtm6
CKLF like MARVEL transmembrane domain containing 6.
      
 0.539
ENSSORP00005032670
CKLF-like MARVEL transmembrane domain containing 7.
      
 0.539
ENSSORP00005014154
Family with sequence similarity 3 member A.
      
 0.536
PLLP
Plasmolipin.
      
 0.495
fam3c
FAM3 metabolism regulating signaling molecule C.
      
 0.433
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.