STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115419769Uncharacterized LOC115419769. (478 aa)    
Predicted Functional Partners:
ENSSORP00005015861
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.848
atxn1l
Ataxin 1 like.
    
0.845
ENSSORP00005037395
Capicua transcriptional repressor a.
    
 
 0.814
CIC
Capicua transcriptional repressor.
    
 
 0.814
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.753
ENSSORP00005030043
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.753
ist1
IST1 factor associated with ESCRT-III.
    
 0.673
ENSSORP00005048553
Pumilio RNA-binding family member 2.
     
 0.639
pum1
Pumilio RNA binding family member 1.
     
 0.639
bbx
BBX high mobility group box domain containing.
    
 
 0.581
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.