STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115421473Very-long-chain 3-oxoacyl-CoA reductase-A-like. (331 aa)    
Predicted Functional Partners:
ENSSORP00005051785
trans-2,3-enoyl-CoA reductase-like 2a.
   
 0.942
hacd2
3-hydroxyacyl-CoA dehydratase 2.
   
 0.941
hacd1
3-hydroxyacyl-CoA dehydratase 1.
   
 0.941
LOC115420672
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase-like.
   
 0.936
hacd4
3-hydroxyacyl-CoA dehydratase 4.
   
 0.936
HACD3
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase-like.
   
 0.932
ENSSORP00005021349
annotation not available
   
 0.932
ENSSORP00005014527
trans-2,3-enoyl-CoA reductase a.
   
 0.930
LOC115421559
Very-long-chain enoyl-CoA reductase.
   
 0.930
ENSSORP00005035630
trans-2,3-enoyl-CoA reductase b.
   
 0.930
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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