STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115420039Mitochondrial intermembrane space import and assembly protein 40-like. (157 aa)    
Predicted Functional Partners:
gfer
Growth factor, augmenter of liver regeneration.
    
 0.973
LOC115413057
Cytochrome c oxidase copper chaperone.
   
 0.968
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.904
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.890
timm13
Translocase of inner mitochondrial membrane 13.
   
 0.872
ENSSORP00005050245
Translocase of inner mitochondrial membrane 8 homolog A (yeast).
   
 0.785
ENSSORP00005052787
POP5 homolog, ribonuclease P/MRP subunit.
   
 
  0.730
timm8b
Translocase of inner mitochondrial membrane 8 homolog B.
   
 0.703
ENSSORP00005002505
TSEN34 tRNA splicing endonuclease subunit.
   
 
  0.697
atp23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
    
 
 0.678
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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