STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005026945Tectorin beta. (308 aa)    
Predicted Functional Partners:
ENSSORP00005029941
BRICHOS domain containing 5.
      
 0.538
lgmn
Legumain.
      
 0.536
LOC115412120
Anterior gradient protein 3-like.
      
 0.535
zdhhc6
Zinc finger DHHC-type containing 6.
      
 0.527
ENSSORP00005040472
Tetratricopeptide repeat domain 8.
      
 0.527
plekhs1
Pleckstrin homology domain containing S1.
      
 0.497
nhlrc2
NHL repeat containing 2.
      
 0.497
ccdc186
Coiled-coil domain containing 186.
      
 0.497
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.463
park7
Parkinsonism associated deglycase.
      
 0.457
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.