STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpk1Cytidine/uridine monophosphate kinase 1. (219 aa)    
Predicted Functional Partners:
cmpk2
Cytidine/uridine monophosphate kinase 2.
    
 0.937
uprt
Uracil phosphoribosyltransferase homolog.
  
 
 0.918
adsl
Adenylosuccinate lyase.
   
 0.905
atp5f1c
ATP synthase F1 subunit gamma.
   
 
 0.905
ENSSORP00005003508
NME/NM23 nucleoside diphosphate kinase 4.
  
 
 0.903
dut
Deoxyuridine triphosphatase.
  
 0.901
umps
Uridine monophosphate synthetase.
   
 0.901
ENSSORP00005029795
annotation not available
   
 0.898
ENSSORP00005029797
annotation not available
   
 0.898
ENSSORP00005032382
Ectonucleoside triphosphate diphosphohydrolase 5a.
   
 
 0.897
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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