STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005027533annotation not available (487 aa)    
Predicted Functional Partners:
tmem86a
Transmembrane protein 86A.
      
 0.536
vstm5
V-set and transmembrane domain containing 5.
      
 0.514
ENSSORP00005033509
Glutamic-oxaloacetic transaminase 2b, mitochondrial.
   
  0.467
LOC115438464
Transmembrane 4 L6 family member 5-like.
      
 0.414
LOC115438372
Transmembrane 4 L6 family member 5-like.
      
 0.414
TM4SF5
Transmembrane 4 L six family member 5.
      
 0.414
med17
Mediator complex subunit 17.
 
    
 0.408
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.