STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005027720NOP2/Sun RNA methyltransferase 3. (357 aa)    
Predicted Functional Partners:
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.983
brix1
Biogenesis of ribosomes BRX1.
   
 0.980
gtpbp4
GTP binding protein 4.
   
 0.972
ENSSORP00005030764
Mitochondrial transcription termination factor 4.
    
 0.972
nip7
Nucleolar pre-rRNA processing protein NIP7.
  
 0.964
ebna1bp2
EBNA1 binding protein 2.
   
 0.962
ENSSORP00005057825
Pescadillo.
   
 0.958
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.953
noc3l
NOC3 like DNA replication regulator.
   
 0.953
nsa2
NSA2 ribosome biogenesis factor.
   
 0.953
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.