STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005028173annotation not available (275 aa)    
Predicted Functional Partners:
ENSSORP00005015394
annotation not available
 
  
 0.871
ENSSORP00005015393
annotation not available
 
  
 0.811
ENSSORP00005017217
RIMS binding protein 2.
    
 0.730
ENSSORP00005018535
annotation not available
    
 0.730
ENSSORP00005043048
annotation not available
    
 0.730
ENSSORP00005040296
annotation not available
   
 0.729
ENSSORP00005020925
annotation not available
    
 0.717
ENSSORP00005029523
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.717
LOC115430583
Peripheral plasma membrane protein CASK-like.
   
 0.703
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.703
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.