STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005028555Transient receptor potential cation channel, subfamily V, member 6. (690 aa)    
Predicted Functional Partners:
ENSSORP00005050650
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.876
calm2
Calmodulin 2.
    
 
 0.857
calm2-2
Calmodulin 2.
    
 
 0.857
calm2-3
Calmodulin 3.
    
 
 0.857
calm2-4
Calmodulin 2.
    
 
 0.857
LOC115437038
cAMP-dependent protein kinase catalytic subunit beta.
    
 0.811
LOC115424263
cAMP-dependent protein kinase catalytic subunit alpha.
    
 0.811
LOC115420176
cAMP-dependent protein kinase catalytic subunit alpha-like.
    
 0.811
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.811
PRKCB
Protein kinase C beta.
    
  0.754
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.