STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005030023E1A binding protein p300 a. (2602 aa)    
Predicted Functional Partners:
tp53
Tumor protein p53.
    
 0.992
ENSSORP00005002645
CREB binding protein a.
  
0.989
crebbp
CREB binding protein.
  
0.989
sp1
Sp1 transcription factor.
   
 0.988
ctnnb1
Catenin beta 1.
    
 0.984
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
   
 
 0.983
ENSSORP00005030057
Interferon regulatory factor 3.
    
 0.961
ENSSORP00005030799
annotation not available
    
 0.961
LOC115427962
Histone acetyltransferase KAT2B.
    
 0.957
kat2a
Lysine acetyltransferase 2A.
    
 0.957
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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