STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czibCXXC motif containing zinc binding protein. (160 aa)    
Predicted Functional Partners:
ENSSORP00005024892
RNA binding motif protein 8A.
   
  0.728
ENSSORP00005025706
RNA binding motif protein 8A.
   
  0.728
med28
Mediator complex subunit 28.
   
    0.619
polr2j
RNA polymerase II subunit J.
   
  
 0.460
rccd1
RCC1 domain containing 1.
      
 0.426
mrpl21
Mitochondrial ribosomal protein L21.
   
    0.418
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.