STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtapMethylthioadenosine phosphorylase. (320 aa)    
Predicted Functional Partners:
srm
Spermidine synthase.
  
 
 0.938
sms
Spermine synthase.
  
 
 0.937
mri1
Methylthioribose-1-phosphate isomerase 1.
 
 
 0.927
gda
Guanine deaminase.
  
 
 0.869
ENSSORP00005002188
Zgc:174895.
  
 
 0.851
aprt
Adenine phosphoribosyltransferase.
  
 
 0.851
LOC115421286
1-aminocyclopropane-1-carboxylate synthase-like protein 1.
    
 0.849
aass
Aminoadipate-semialdehyde synthase.
    
  0.842
ENSSORP00005016288
Eukaryotic translation elongation factor 1 gamma.
  
 
 0.836
apip
APAF1 interacting protein.
  
 
 0.834
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.