STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005030615annotation not available (335 aa)    
Predicted Functional Partners:
ENSSORP00005023954
CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae).
   
 0.960
ENSSORP00005002805
Excision repair cross-complementation group 3.
   
 0.954
ENSSORP00005054954
SMC5-SMC6 complex localization factor 1.
  
 0.951
LOC115426410
General transcription factor IIH subunit 2-like.
    
 0.949
gtf2h1
General transcription factor IIH subunit 1.
    
 0.949
mnat1
MNAT1 component of CDK activating kinase.
    
 0.948
gtf2h3
General transcription factor IIH subunit 3.
    
 0.947
gtf2h4
General transcription factor IIH subunit 4.
    
 0.946
gtf2e1
General transcription factor IIE subunit 1.
   
 0.943
chtf8
Chromosome transmission fidelity factor 8.
   
 0.941
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.