STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115416136Ceramide glucosyltransferase. (394 aa)    
Predicted Functional Partners:
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.912
ENSSORP00005034316
Delta(4)-desaturase, sphingolipid 2.
   
 
 0.895
degs1
Delta 4-desaturase, sphingolipid 1.
   
 
 0.895
ENSSORP00005031626
Sphingomyelin phosphodiesterase 1.
     
 0.890
ENSSORP00005035137
N-acylsphingosine amidohydrolase 2.
     
 0.889
ENSSORP00005012665
N-acylsphingosine amidohydrolase (acid ceramidase) 1b.
     
 0.879
ENSSORP00005024760
Alkaline ceramidase 1.
     
 0.879
gba
Glucosylceramidase beta.
     
 0.877
LOC115422787
Ceramide kinase-like.
    
 0.874
ENSSORP00005011543
annotation not available
    
 0.870
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.