STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005030764Mitochondrial transcription termination factor 4. (307 aa)    
Predicted Functional Partners:
nsun4
NOP2/Sun RNA methyltransferase 4.
    
 0.974
ENSSORP00005027720
NOP2/Sun RNA methyltransferase 3.
    
 0.972
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.894
mtg1
Mitochondrial ribosome associated GTPase 1.
   
 
 0.888
malsu1
Mitochondrial assembly of ribosomal large subunit 1.
    
 
 0.884
mrpl58
Mitochondrial ribosomal protein L58.
    
 
 0.884
mrm2
Mitochondrial rRNA methyltransferase 2.
    
 
 0.879
mtg2
Mitochondrial ribosome associated GTPase 2.
    
 
 0.876
mrpl12
Mitochondrial ribosomal protein L12.
    
 
 0.865
ENSSORP00005051669
Mitochondrial ribosomal protein S18A.
   
 0.863
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.