STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpx1Glutathione peroxidase 1. (142 aa)    
Predicted Functional Partners:
gpx7
Glutathione peroxidase 7.
  
 
 0.933
gpx8
Glutathione peroxidase 8 (putative).
  
  
 0.927
gsr
Glutathione-disulfide reductase.
  
 0.922
gstk1
Glutathione S-transferase kappa 1.
   
 0.892
gsto1
Glutathione S-transferase omega 1.
   
 0.881
LOC115434394
Glutathione S-transferase 3-like.
   
 
 0.880
PRDX6
Peroxiredoxin 6.
  
 0.877
LOC115418166
Peroxiredoxin-6-like.
  
 0.877
LOC115422711
Glutathione S-transferase Mu 1-like.
   
 
 0.873
ppargc1a
PPARG coactivator 1 alpha.
     
 0.868
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.