STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115413798Interleukin-18 receptor 1-like. (532 aa)    
Predicted Functional Partners:
ENSSORP00005046818
annotation not available
   
 0.988
IL1RAP
Interleukin-1 receptor accessory protein-like.
   
0.871
LOC115429617
Interleukin-1 beta-like.
   
 0.868
LOC115426502
Interleukin-1 beta-like.
   
 
 0.861
myd88
MYD88 innate immune signal transduction adaptor.
   
 
 0.858
ENSSORP00005029853
annotation not available
  
 0.834
LOC115411828
Interleukin-1 receptor type 1-like.
   
 
0.712
LOC115412866
Interleukin-1 receptor type 1-like.
  
 
0.639
ENSSORP00005030034
annotation not available
   
 
0.589
tnfsf13b
TNF superfamily member 13b.
   
 0.494
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.