STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115434348Polycystic kidney disease 2-like 1 protein. (794 aa)    
Predicted Functional Partners:
ENSSORP00005006104
Polycystic kidney disease 1a.
    
0.985
ENSSORP00005036034
annotation not available
    
0.954
ENSSORP00005052212
Polycystic kidney disease 1 like 2a.
    
0.954
exoc5
Exocyst complex component 5.
     
 0.795
trrap
Transformation/transcription domain associated protein.
    
  0.720
ENSSORP00005035139
Coiled-coil domain containing 25.
    
 0.695
supt3h
SPT3 homolog, SAGA and STAGA complex component.
     
 0.685
ENSSORP00005031753
Exocyst complex component 6.
     
 0.664
ENSSORP00005039554
Exocyst complex component 6B.
     
 0.664
ENSSORP00005021420
Exocyst complex component 4.
     
 0.663
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.