STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115412579Homeobox protein Hox-D9a-like. (272 aa)    
Predicted Functional Partners:
hoxd10
Homeobox D10.
   
  
0.846
ENSSORP00005043423
Homeobox C10a.
   
  
0.794
hoxd3
Homeobox D3.
   
 
0.617
hoxd4
Homeobox D4.
   
 
0.615
hoxb8
Homeobox B8.
   
 
0.511
hoxc8
Homeobox C8.
   
 
0.511
ENSSORP00005008889
Homeobox B7a.
   
 
0.488
LOC115428529
Homeobox protein Hox-A4.
   
 
0.472
hoxc4
Homeobox C4.
   
 
0.472
ENSSORP00005056466
annotation not available
   
 
0.472
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.