STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115435040Vascular endothelial growth factor A-A-like. (138 aa)    
Predicted Functional Partners:
ENSSORP00005019730
annotation not available
    
 0.978
LOC115437585
Adhesion G protein-coupled receptor L2-like.
    
 
 0.967
ENSSORP00005018197
Adhesion G protein-coupled receptor L1a.
    
 
 0.967
ENSSORP00005029701
Adhesion G protein-coupled receptor L3.1.
    
 
 0.967
ENSSORP00005038084
annotation not available
    
 
 0.967
ENSSORP00005052226
Adhesion G protein-coupled receptor L2a.
    
 
 0.967
ENSSORP00005058077
annotation not available
    
 
 0.967
pdgfrb
Platelet derived growth factor receptor beta.
    
 0.965
flt4
Fms related tyrosine kinase 4.
    
 0.965
LOC115427219
Vascular endothelial growth factor receptor kdr-like.
    
 0.965
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.