STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL7ARibosomal protein L7a. (268 aa)    
Predicted Functional Partners:
rplp0
Ribosomal protein lateral stalk subunit P0.
  
 0.999
rps6
Ribosomal protein S6.
  
 0.999
ENSSORP00005002960
Ribosomal protein L38.
   
 0.999
rpl28
Ribosomal protein L28.
   
 0.999
rps2
Ribosomal protein S2.
  
 0.999
ENSSORP00005007308
Ribosomal protein S18.
  
 0.999
rpl4
Ribosomal protein L4.
  
 0.999
rpl36
Ribosomal protein L36.
   
 0.999
rpl31
Ribosomal protein L31.
  
 0.999
rpl27
Ribosomal protein L27.
  
 0.999
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.