STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005033634Si:dkey-32e23.4. (701 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.990
pgam5
PGAM family member 5, mitochondrial serine/threonine protein phosphatase.
    
 0.912
ENSSORP00005048505
Intersectin 2b.
    
 
 0.898
ITSN2
Intersectin 2.
    
 
 0.898
LOC115415109
Mitochondrial dynamics protein MID51-like.
    
 
 0.862
LOC115438903
Receptor-interacting serine/threonine-protein kinase 3-like.
   
 0.854
ripk1
Receptor interacting serine/threonine kinase 1.
   
 0.853
ENSSORP00005053371
Parkin RBR E3 ubiquitin protein ligase.
    
 0.852
ENSSORP00005028541
annotation not available
   
 0.851
pink1
PTEN induced kinase 1.
    
 0.846
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.