STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005033669Calcium voltage-gated channel auxiliary subunit alpha2delta 1. (1049 aa)    
Predicted Functional Partners:
LOC115424456
Voltage-dependent calcium channel gamma-1 subunit-like.
    
 0.941
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.941
cacnb1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.903
ENSSORP00005000933
Calcium channel, voltage-dependent, L type, alpha 1D subunit, a.
   
 0.863
ENSSORP00005008058
Calcium channel, voltage-dependent, L type, alpha 1S subunit, b.
   
 0.863
ENSSORP00005016086
Calcium channel, voltage-dependent, L type, alpha 1F subunit a.
   
 0.863
ENSSORP00005023016
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
   
 0.863
ENSSORP00005026037
annotation not available
   
 0.863
ENSSORP00005027233
Calcium channel, voltage-dependent, L type, alpha 1F subunit.
   
 0.863
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
   
 0.863
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.