STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chchd1Coiled-coil-helix-coiled-coil-helix domain containing 1. (119 aa)    
Predicted Functional Partners:
mrps10
Mitochondrial ribosomal protein S10.
   
  0.999
mrps33
Mitochondrial ribosomal protein S33.
   
 0.999
mrps24
Mitochondrial ribosomal protein S24.
   
 0.999
mrps7
Mitochondrial ribosomal protein S7.
   
 0.999
ENSSORP00005018864
Mitochondrial ribosomal protein S6.
   
  0.999
mrps16
Mitochondrial ribosomal protein S16.
   
  0.999
mrps23
Mitochondrial ribosomal protein S23.
   
  0.999
mrps14
Mitochondrial ribosomal protein S14.
   
  0.999
ENSSORP00005043518
Mitochondrial ribosomal protein S28.
   
  0.999
mrps17
Mitochondrial ribosomal protein S17.
   
 0.999
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.