STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccn2Cellular communication network factor 2. (346 aa)    
Predicted Functional Partners:
LOC115428868
CCN family member 2-like.
  
  
 
0.842
ccn5
Cellular communication network factor 5.
  
  
 
0.817
ccn1
Cellular communication network factor 1.
  
  
0.794
ENSSORP00005049542
Heparan sulfate proteoglycan 2.
    
 
 0.630
ENSSORP00005031443
Yes-associated protein 1.
   
 0.608
LOC115432149
Transforming growth factor beta-1 proprotein-like.
   
  
 0.594
dcn
Decorin.
   
  
 0.578
serpine1
Serpin family E member 1.
   
  
 0.548
edn1
Endothelin 1.
   
  
 0.547
vegfa
Vascular endothelial growth factor A.
      
 0.539
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.