STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005034892Rho GTPase activating protein 42b. (869 aa)    
Predicted Functional Partners:
LOC115419450
Cell division control protein 42 homolog.
    
 0.519
CDC42
Cell division control protein 42 homolog.
    
 0.519
LOC115422338
Rho-related GTP-binding protein RhoA-C.
    
 0.495
LOC115419102
Rho-related GTP-binding protein RhoA-D-like.
    
 0.495
LOC115422748
Rho-related GTP-binding protein RhoA-C-like.
    
 0.495
LOC115422536
Transforming protein RhoA-like.
    
 0.495
LOC115422587
Rho-related GTP-binding protein RhoA-D.
    
 0.495
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.495
LOC115418861
Transforming protein RhoA.
    
 0.495
RAC1
Rac family small GTPase 1.
    
  0.482
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.