STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115428052-2Elongation factor 1-alpha. (496 aa)    
Predicted Functional Partners:
ENSSORP00005016288
Eukaryotic translation elongation factor 1 gamma.
   
 0.999
eef1b2
Eukaryotic translation elongation factor 1 beta 2.
   
 0.983
rps2
Ribosomal protein S2.
   
 0.962
rps3
Ribosomal protein S3.
   
 0.954
rps3a
Ribosomal protein S3A.
  
 0.952
LOC115423452
40S ribosomal protein SA.
  
 0.948
etf1
Eukaryotic translation termination factor 1.
   
 0.943
papss1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
 
   
 0.943
LOC115434214
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like.
 
   
 0.943
rplp0
Ribosomal protein lateral stalk subunit P0.
   
 0.941
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.