STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfpqSplicing factor proline and glutamine rich. (701 aa)    
Predicted Functional Partners:
ENSSORP00005009340
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.660
nudt21
Nudix hydrolase 21.
   
 
 0.557
LOC115413823
Tyrosine-protein kinase fyna.
    
  0.510
fyn
FYN proto-oncogene, Src family tyrosine kinase.
    
  0.510
LOC115422247
Tyrosine-protein kinase SRK3-like.
    
  0.510
LOC115422249
Protein-tyrosine kinase 6-like.
    
  0.510
ENSSORP00005031176
annotation not available
    
  0.510
ENSSORP00005031177
annotation not available
    
  0.510
LOC115428316
Proto-oncogene tyrosine-protein kinase Yrk-like.
    
  0.510
ENSSORP00005034336
Matrin 3-like 1.1.
   
 
 0.483
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.