STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkx2-4NK2 homeobox 4. (383 aa)    
Predicted Functional Partners:
gata6
GATA binding protein 6.
   
 0.499
gata5
GATA binding protein 5.
   
 0.499
ENSSORP00005047019
GATA binding protein 4.
   
 0.499
LOC115419149
GATA-binding factor 1-B-like.
   
 0.488
GATA2
GATA binding protein 2.
   
 0.461
ENSSORP00005014346
Trichorhinophalangeal syndrome I.
   
 0.461
gata3
GATA binding protein 3.
   
 0.461
LOC115419023
GATA-binding factor 2-like.
   
 0.461
ENSSORP00005058637
annotation not available
   
 0.461
ENSSORP00005035659
annotation not available
   
 
 0.429
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.