STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115419642Protein kinase C delta type-like. (673 aa)    
Predicted Functional Partners:
card11
Caspase recruitment domain family member 11.
   
 0.944
pdpk1
3-phosphoinositide dependent protein kinase 1.
    
0.891
ncf1
Neutrophil cytosolic factor 1.
   
 0.877
LOC115423574
Caspase recruitment domain-containing protein 10-like.
    
 0.874
LOC115412629
Cytotoxic T-lymphocyte protein 4-like.
    
 0.868
LOC115423922
Mitogen-activated protein kinase 1-like.
  
 
0.867
LOC115410174
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 
0.865
LOC115426992
Mitogen-activated protein kinase 9-like.
    
 
0.865
ENSSORP00005012551
A-Raf proto-oncogene, serine/threonine kinase.
    
0.864
mapk1
Mitogen-activated protein kinase 1.
    
0.857
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.