STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005035833Ferric-chelate reductase 1a. (483 aa)    
Predicted Functional Partners:
ENSSORP00005038931
Mitochondrial ribosomal protein L23.
   
 
 0.943
mrpl46
Mitochondrial ribosomal protein L46.
   
   0.930
mrpl3
Mitochondrial ribosomal protein L3.
   
   0.926
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.912
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.910
mrpl16
Mitochondrial ribosomal protein L16.
   
 
 0.908
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.908
ENSSORP00005049942
Mitochondrial ribosomal protein L22.
   
 
 0.907
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.906
mrps15
Mitochondrial ribosomal protein S15.
   
   0.903
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.