STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005035932RAB36, member RAS oncogene family. (266 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.900
LOC115421972
Rab GDP dissociation inhibitor alpha.
   
 0.847
ENSSORP00005049730
Zgc:112334.
   
 0.847
LOC115430537
Rab GDP dissociation inhibitor beta-like.
   
 0.847
vps52
VPS52 subunit of GARP complex.
    
 0.829
vps53
VPS53 subunit of GARP complex.
    
 0.815
ENSSORP00005018214
Component of oligomeric golgi complex 6.
   
 0.812
vps54
VPS54 subunit of GARP complex.
    
 0.799
LOC115436933
Conserved oligomeric Golgi complex subunit 8-like.
    
 0.789
ENSSORP00005018521
Component of oligomeric golgi complex 8.
    
 0.789
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.