STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005036334Rhophilin associated tail protein 1-like. (95 aa)    
Predicted Functional Partners:
rsph3
Radial spoke head 3.
    
 
 0.633
rhpn2
Rhophilin Rho GTPase binding protein 2.
    
 0.629
ENSSORP00005034666
Ring finger protein 17.
      
 0.609
wbp2
WW domain binding protein 2.
      
 0.607
ENSSORP00005033324
Carboxymethylenebutenolidase homolog (Pseudomonas).
      
 0.537
ENSSORP00005007516
annotation not available
      
 0.527
ENSSORP00005000986
annotation not available
      
 0.503
ENSSORP00005043367
annotation not available
      
 0.503
wbp2nl
WBP2 N-terminal like.
      
 0.499
ENSSORP00005032115
Ciliogenesis associated TTC17 interacting protein.
      
 0.489
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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