STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005036608annotation not available (885 aa)    
Predicted Functional Partners:
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.771
ENSSORP00005004965
annotation not available
    
 0.698
ENSSORP00005005651
SEC31 homolog B, COPII coat complex component.
    
 0.698
ENSSORP00005050882
SEC31 homolog A, COPII coat complex component.
    
 0.698
ENSSORP00005032590
Sec23 homolog A, coat complex II component.
   
 0.692
LOC115419567
Protein transport protein Sec23B.
   
 0.692
LOC115423404
Ankyrin repeat domain-containing protein 40-like.
    
 0.667
sec24d
SEC24 homolog D, COPII coat complex component.
   
 
 0.611
ENSSORP00005021384
Selenoprotein I.
   
 
 0.605
ENSSORP00005039603
annotation not available
   
 0.595
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.